STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep83Centrosomal protein 83. (721 aa)    
Predicted Functional Partners:
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
   
 0.806
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.767
uso1
USO1 vesicle transport factor.
   
 0.760
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.739
LOC103366835
Uncharacterized protein.
  
 0.734
LOC103362356
RAB11a, member RAS oncogene family, like.
  
 0.734
LOC103369191
Uncharacterized protein.
  
 0.734
LOC103370860
RAB11B, member RAS oncogene family, a.
  
 0.734
rab11a
RAB11A, member RAS oncogene family.
  
 0.734
LOC103376177
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.729
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (18%) [HD]