STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acy1Aminoacylase 1. (419 aa)    
Predicted Functional Partners:
otc
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.942
arg2
Arginase.
  
 
 0.923
ENSSPAP00000018475
Uncharacterized protein.
  
 0.908
ASS1
Argininosuccinate synthase 1.
  
 0.908
ARG1
Arginase.
  
 
 0.897
LOC103363216
Malate synthase-like.
    
 0.886
nags
N-acetylglutamate synthase.
  
 
 0.882
agmat
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.876
oat
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.871
cth
Cystathionase (cystathionine gamma-lyase), like.
  
 0.853
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.