STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcd2ATP-binding cassette, sub-family D (ALD), member 2. (737 aa)    
Predicted Functional Partners:
abcd3
ATP-binding cassette, sub-family D (ALD), member 3a.
  
0.909
abcd4
ATP-binding cassette, sub-family D (ALD), member 4.
  
0.901
pex19
Peroxisomal biogenesis factor 19.
    
 0.895
pex3
Peroxisomal biogenesis factor 3.
   
 0.839
abcd1
ATP-binding cassette, sub-family D (ALD), member 1.
  
  
 
0.827
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.822
pex14
Peroxisomal biogenesis factor 14.
   
 0.809
lmbrd1
LMBR1 domain containing 1.
    
 0.775
fam185a
Family with sequence similarity 185 member A.
   
 0.773
LOC103367377
Peroxisomal biogenesis factor 12.
   
 
 0.760
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.