STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc88aUncharacterized protein. (116 aa)    
Predicted Functional Partners:
CCDC88A
Coiled-coil domain containing 88A.
 
      0.900
ENSSPAP00000001076
Coiled-coil domain containing 88B.
 
      0.462
LOC103373424
Uncharacterized protein.
    
 
 0.404
LOC103367862
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
    
 
 0.404
LOC103356208
Guanine nucleotide binding protein (G protein) alpha v1.
    
 
 0.404
LOC103374184
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
    
 
 0.404
gnai1
Uncharacterized protein.
    
 
 0.404
LOC103373780
Uncharacterized protein.
    
 
 0.404
LOC103360398
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
    
 
 0.404
LOC103358732
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.
    
 
 0.404
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.