STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103370377Uncharacterized protein. (1099 aa)    
Predicted Functional Partners:
LOC103357640
Uncharacterized protein.
  
  
 
0.819
LOC103361723
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.624
LOC103367507
TNF receptor-associated factor 6-like.
    
 0.624
rnf41
Ring finger protein 41.
    
  0.617
traf4
TNF receptor-associated factor.
    
 0.612
map3k11
Mitogen-activated protein kinase kinase kinase.
   
0.608
ENSSPAP00000005072
Protein kinase domain-containing protein.
    
 0.592
map3k7
Mitogen-activated protein kinase kinase kinase 7.
    
0.592
LOC103355069
Sterile alpha motif and leucine zipper containing kinase AZK.
    
 
0.591
LOC103372265
Protein kinase domain-containing protein.
    
 
0.591
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.