STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn18Protein tyrosine phosphatase non-receptor type 18. (599 aa)    
Predicted Functional Partners:
LOC103375938
Tyrosine-protein kinase.
   
 0.803
matk
Tyrosine-protein kinase.
   
 0.803
CSK
Tyrosine-protein kinase.
   
 0.803
SHC3
SHC adaptor protein 3.
    
 0.756
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.756
ENSSPAP00000026412
Uncharacterized protein.
    
 0.756
LOC103354950
Proline-serine-threonine phosphatase interacting protein 1b.
   
 
 0.719
pstpip1
Proline-serine-threonine phosphatase interacting protein 1a.
   
 
 0.719
cd247
Uncharacterized protein.
   
 0.713
LOC103369844
Ig_4 domain-containing protein.
   
 0.677
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.