STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000022758CD109 molecule. (1109 aa)    
Predicted Functional Partners:
cfp
Uncharacterized protein.
   
 0.765
LOC103361728
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.735
c9
Complement component 9.
   
 0.730
RING1
Ring finger protein 1.
    
 0.718
rnf2
Ring finger protein 2.
    
 0.718
ENSSPAP00000012080
Chromo domain-containing protein.
    
 0.715
cbx8
Chromobox homolog 8b.
    
 0.713
LOC103361729
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.713
ENSSPAP00000019384
Uncharacterized protein.
    
 0.696
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.693
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.