STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000022947Coagulation factor VII, like. (432 aa)    
Predicted Functional Partners:
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
  
 0.874
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
  
0.857
LOC103363939
Uncharacterized protein.
    
 0.856
LOC103365630
Tissue factor pathway inhibitor.
    
 0.806
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.750
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
    
  0.750
LOC103360420
Macrophage stimulating 1 receptor a.
    
  0.750
mst1r
Macrophage stimulating 1 receptor b.
    
  0.750
serpina10
Si:ch1073-416d2.3; Belongs to the serpin family.
  
 0.749
LOC103356251
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
   
 0.721
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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