STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103365241Synaptojanin 1. (1568 aa)    
Predicted Functional Partners:
LOC103371221
Intersectin 2b.
    
 
 0.921
ENSSPAP00000031427
Uncharacterized protein.
    
 
 0.921
ENSSPAP00000031428
Uncharacterized protein.
    
 
 0.921
LOC103356828
SAC1 like phosphatidylinositide phosphatase a.
    
0.905
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
0.905
LOC103369594
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.878
pi4k2b
Phosphatidylinositol 4-kinase type 2 beta.
     
 0.872
pi4k2a
Phosphatidylinositol 4-kinase type 2 alpha.
     
 0.872
LOC103361609
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.
    
 0.868
LOC103366150
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
    
 0.868
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.