STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103359690NADPH oxidase activator 1. (537 aa)    
Predicted Functional Partners:
ncf4
Neutrophil cytosolic factor 4.
   
 0.994
ncf1
Neutrophil cytosolic factor 1.
   
 0.990
LOC103372224
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.952
rac3
Rac family small GTPase 3b.
   
 0.862
rac2
Uncharacterized protein.
   
 0.862
RAC1
Rac family small GTPase 1.
   
 0.862
LOC103376111
Uncharacterized protein.
   
 0.862
noxo1
NADPH oxidase organizer 1a.
   
 0.860
LOC103357978
NADPH oxidase organizer 1b.
   
 0.860
nox1
NADPH oxidase 1.
   
 0.854
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.