STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000023145Calponin-homology (CH) domain-containing protein. (182 aa)    
Predicted Functional Partners:
afdn
Afadin, adherens junction formation factor a.
    
 0.937
LOC103359947
Actinin, alpha 1.
    
 0.909
ACTN4
Actinin alpha 4.
    
 0.909
ENSSPAP00000009018
DUF4757 domain-containing protein.
 
      0.899
ENSSPAP00000009003
PDZ domain-containing protein.
 
      0.895
commd6
COMM domain containing 6.
     
 0.649
VANGL1
Vang-like protein.
    
 0.648
LOC103352916
Uncharacterized protein.
    
 0.648
LOC103369234
Vang-like protein.
    
 0.648
LOC103367097
Vang-like protein.
    
 0.648
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.