STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pctpPhosphatidylcholine transfer protein. (213 aa)    
Predicted Functional Partners:
acot13
Acyl-CoA thioesterase 13.
    
 
 0.638
stard5
StAR-related lipid transfer (START) domain containing 5.
   
  
 0.543
stard3
StAR-related lipid transfer (START) domain containing 3.
      
 0.527
LOC103372885
StAR-related lipid transfer (START) domain containing 15.
      
 0.506
LOC103365054
PDZ domain-containing protein.
      
 0.418
gramd1c
GRAM domain containing 1c.
      
 0.418
acot9
Acyl-CoA thioesterase 9, tandem duplicate 2.
      
 0.416
LOC103353186
Histone PARylation factor 1.
      
 0.414
gramd1a
GRAM domain containing 1A.
      
 0.403
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.