STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000023254Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.769
pcgf6
Polycomb group ring finger 6.
    
 
 0.697
pcgf1
Polycomb group ring finger 1.
    
 
 0.697
mllt3
MLLT3 super elongation complex subunit.
    
 
 0.670
mllt1
MLLT1 super elongation complex subunit a.
    
 
 0.670
LOC103357615
Uncharacterized protein.
    
 
 0.663
bcl6
BCL6A transcription repressor a.
    
 
 0.663
bcl6b
BCL6B transcription repressor.
    
 
 0.663
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.643
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.619
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.