STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371354Homeobox domain-containing protein. (428 aa)    
Predicted Functional Partners:
ENSSPAP00000002546
Teashirt zinc finger homeobox 2.
    
 0.599
tshz3
Teashirt zinc finger homeobox 3b.
    
 0.599
LOC103363989
Teashirt zinc finger homeobox 3a.
    
 0.599
ENSSPAP00000017425
Teashirt zinc finger homeobox 1.
    
 0.599
TSHZ1
Teashirt zinc finger homeobox 1.
    
 0.599
LOC103364900
Pre-B-cell leukemia homeobox 1a.
    
0.587
ENSSPAP00000007462
PBC domain-containing protein.
    
 0.587
pbx1
Homeobox domain-containing protein.
    
0.587
pbx3
Homeobox domain-containing protein.
    
0.587
LOC103372009
Homeobox domain-containing protein.
    
 0.587
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.