STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103360945Si:dkey-33i11.1. (647 aa)    
Predicted Functional Partners:
ptprc
Protein tyrosine phosphatase receptor type C.
    
  0.842
LOC103353259
Uncharacterized protein.
  
 
  0.626
ENSSPAP00000024158
Uncharacterized protein.
    
 
0.620
LOC103360608
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.616
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.616
ENSSPAP00000013479
Uncharacterized protein.
    
  0.616
LOC103376248
Uncharacterized protein.
    
  0.616
LOC103363383
Uncharacterized protein.
   
 0.611
ENSSPAP00000008117
Uncharacterized protein.
    
  0.607
hgfac
HGF activator.
    
  0.607
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.