STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103367555Caveolae associated protein 4b. (311 aa)    
Predicted Functional Partners:
mad2l2
Mitotic arrest deficient 2 like 2.
    
   0.537
tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.523
LOC103363570
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.522
LOC103356816
Inhibin subunit beta B.
   
 0.515
INHBB
TGF_BETA_2 domain-containing protein.
   
 0.515
LOC103366771
Inhibin subunit beta Aa.
   
 0.512
LOC103373865
TGF_BETA_2 domain-containing protein.
   
 0.512
gdf15
TGF_BETA_2 domain-containing protein.
    
 0.507
bend3
BEN domain containing 3.
    
 0.507
mstn
Myostatin b.
    
 0.507
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.