STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aarsd1Alanyl-tRNA synthetase domain containing 1. (412 aa)    
Predicted Functional Partners:
LOC103367014
Prostaglandin E synthase 3 like.
 
   
  0.965
aars1
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
   
 
 0.862
aars2
Alanyl-tRNA synthetase 2, mitochondrial (putative); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
   
 
 0.862
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
   
 
 0.619
bicral
BRD4 interacting chromatin remodeling complex associated protein like.
   
 
 0.619
bicra
BRD4 interacting chromatin remodeling complex associated protein.
   
 
 0.619
LOC103368333
Prostaglandin E synthase 3a (cytosolic).
     
 0.613
ptges3
Prostaglandin E synthase 3b (cytosolic).
     
 0.613
eprs1
Glutamyl-prolyl-tRNA synthetase.
     
 0.611
LOC103361057
Prostaglandin E synthase 2-like.
     
 0.561
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.