STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gopcGolgi-associated PDZ and coiled-coil motif containing. (298 aa)    
Predicted Functional Partners:
cftr
Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer.
   
 0.915
ENSSPAP00000027029
Ras homolog family member H.
    
 0.794
LOC103370959
Ras homolog family member Q.
    
 0.794
ttc26
Tetratricopeptide repeat domain 26.
   
 0.782
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.723
pick1
Protein interacting with prkca 1.
    
 0.706
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.699
LOC103355560
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
0.696
ift172
Intraflagellar transport 172.
    
 0.696
magi3
Uncharacterized protein.
    
 0.696
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (28%) [HD]