STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103369854Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
ENSSPAP00000010289
Uncharacterized protein.
   
  
 0.688
rchy1
Uncharacterized protein.
   
    0.675
nkx2-5
NK2 homeobox 5.
    
 
 0.551
LOC103354529
H6 family homeobox 4.
    
 
 0.504
LOC103364005
H6 family homeobox 3a.
    
 
 0.504
hmx3
H6 family homeobox 3.
    
 
 0.504
prickle2
Prickle homolog 2b.
      
 0.499
LOC103362962
Prickle homolog 2a.
      
 0.499
LOC103355202
Prickle homolog 1b.
      
 0.499
PRICKLE1
Prickle homolog 1a.
      
 0.495
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.