STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103369329TNF receptor-associated factor. (572 aa)    
Predicted Functional Partners:
LOC103370644
CD40 molecule, TNF receptor superfamily member 5.
   
 0.986
ENSSPAP00000000091
TRAF family member-associated NFKB activator.
    
 0.983
tradd
Tnfrsf1a-associated via death domain.
    
 0.978
ENSSPAP00000005790
Protein kinase domain-containing protein.
   
 0.969
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.962
LOC103361723
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
0.957
LOC103367507
TNF receptor-associated factor 6-like.
   
0.957
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 0.953
LOC103365293
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.929
LOC103356101
Uncharacterized protein.
    
 0.921
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.