STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a10Solute carrier family 38 member 10. (1126 aa)    
Predicted Functional Partners:
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
  
  
 0.800
LOC103366304
Ras-related GTP binding A.
   
 0.759
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.723
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.706
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.705
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.703
sin3a
SIN3 transcription regulator family member Aa.
    
 0.627
LOC103368873
SIN3 transcription regulator family member Ab.
    
 0.627
sin3b
SIN3 transcription regulator family member B.
    
 0.627
LOC103374020
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.621
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (30%) [HD]