STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000024385Tumor necrosis factor, alpha-induced protein 6. (229 aa)    
Predicted Functional Partners:
tnfaip6
Tumor necrosis factor, alpha-induced protein 6.
 
      0.899
LOC103354873
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.837
LOC103362339
Interleukin-1.
   
 0.802
ptx3
Pentraxin 3, long b.
   
 
 0.774
cd44
CD44 molecule (Indian blood group) b.
     
0.710
ENSSPAP00000029355
LAM_G_DOMAIN domain-containing protein.
    
 0.701
ENSSPAP00000029361
VWFA domain-containing protein.
    
 0.701
LOC103370178
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
    
 0.669
ENSSPAP00000008117
Uncharacterized protein.
    
 0.665
hgfac
HGF activator.
    
 0.665
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.