STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103370811Uncharacterized protein. (327 aa)    
Predicted Functional Partners:
LOC103370041
BHLH domain-containing protein.
   
 
 0.506
kpnb1
Karyopherin (importin) beta 1.
    
   0.482
rcor1
REST corepressor 1.
    
 0.480
rcor2
REST corepressor 2.
    
 0.480
rcor3
REST corepressor 3.
    
 0.480
LOC103368461
Neuronal differentiation 4.
   
  
 0.442
LOC103368849
T-box transcription factor Ta.
    
 0.417
tbx21
T-box transcription factor 21.
    
 0.417
ENSSPAP00000023217
Uncharacterized protein.
    
 0.417
tbxt
T-box transcription factor Tb.
    
 0.417
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.