STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103372133Solute carrier family 22 member 13b. (502 aa)    
Predicted Functional Partners:
LOC103363216
Malate synthase-like.
   
 
 0.880
suox
Sulfite oxidase.
     
 0.864
pla2g4a
Phospholipase A2.
    
 0.833
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.626
ints9
Integrator complex subunit 9.
    
 0.615
ints1
Integrator complex subunit 1.
    
 0.606
ints11
Integrator complex subunit 11.
    
 0.601
ints3
Integrator complex subunit 3.
    
 0.599
ENSSPAP00000029655
Uncharacterized protein.
    
 0.599
ints7
Integrator complex subunit 7.
    
 0.597
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.