STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hexaBeta-hexosaminidase. (571 aa)    
Predicted Functional Partners:
hexd
Hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing.
     
 0.904
naga
Alpha-galactosidase.
   
 
 0.891
gla
Alpha-galactosidase.
   
 
 0.889
glb1
Beta-galactosidase.
  
 
 0.874
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.874
LOC103374629
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
 0.871
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
 0.871
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.870
ENSSPAP00000001264
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.860
ENSSPAP00000023549
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.860
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.