STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103367588ATP/GTP binding protein-like 4. (141 aa)    
Predicted Functional Partners:
AGBL4
ATP/GTP binding protein like 4.
 
      0.866
ttll4
Tubulin tyrosine ligase-like family, member 4.
    
 
 0.636
bend5
BEN domain containing 5.
 
   
 0.593
LOC103364099
Uncharacterized protein.
      
 0.487
LOC103368176
Mitogen-activated protein kinase.
     
 0.463
mapk12
Mitogen-activated protein kinase.
     
 0.463
LOC103367857
Zgc:171775.
     
 0.463
LOC103370234
Mitogen-activated protein kinase.
     
 0.463
LOC103359230
Mitogen-activated protein kinase.
     
 0.463
mapk11
Mitogen-activated protein kinase.
     
 0.463
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.