STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103373808PDZ domain-containing protein. (143 aa)    
Predicted Functional Partners:
LOC103375252
Uncharacterized protein.
 
      0.897
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.867
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.851
rapgef6
Rap guanine nucleotide exchange factor (GEF) 6.
    
  0.776
PTEN
Phosphatase and tensin homolog B.
    
 0.688
LOC103354477
Transmembrane phosphatase with tensin homology.
    
 0.688
LOC103360879
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
    
 0.688
frmd1
FERM domain containing 1.
    
 0.676
frmd6
FERM domain containing 6.
    
 0.676
LOC103359554
Uncharacterized protein.
    
 0.664
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.