STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103359711RNA binding motif protein 4.1. (422 aa)    
Predicted Functional Partners:
ENSSPAP00000001643
Uncharacterized protein.
  
 0.736
ENSSPAP00000028120
annotation not available
  
 0.736
cirbp
Cold inducible RNA binding protein b.
  
 0.725
LOC103375254
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.691
LOC103359197
Heterogeneous nuclear ribonucleoprotein A/Ba.
  
 0.687
hnrnpd
Heterogeneous nuclear ribonucleoprotein D.
  
 0.687
LOC103363899
Uncharacterized protein.
  
 0.680
tra2b
Transformer 2 beta homolog.
  
  0.678
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.675
LOC103364541
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.675
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.