STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acbd3Acyl-Coenzyme A binding domain containing 3. (548 aa)    
Predicted Functional Partners:
LOC103369594
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.936
pi4kb
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.936
golgb1
Golgin B1.
    
 0.790
LOC103358095
Hematopoietic cell-specific Lyn substrate 1.
    
 0.790
cttn
Cortactin.
    
 0.790
blzf1
Basic leucine zipper nuclear factor 1.
    
 
 0.763
spag5
Si:dkey-25o16.4.
    
 0.761
golga3
Golgin A3.
   
 0.710
spty2d1
SPT2 chromatin protein domain containing 1.
    
 0.660
tmem192
Uncharacterized protein.
    
 0.660
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.