STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103376537Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
fancc
FA complementation group C.
    
  0.672
fancl
FA complementation group L.
    
  0.672
fancg
FA complementation group G.
    
  0.672
ENSSPAP00000030496
FA complementation group F.
    
  0.672
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.644
fance
FA complementation group E.
    
  0.644
nutf2
Nuclear transport factor 2.
    
  0.641
LOC103371605
NTF2 domain-containing protein.
    
  0.641
mrpl1
Mitochondrial ribosomal protein L1.
    
  0.618
LOC103366709
Period circadian clock 2.
    
 0.484
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.