STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hhatHedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family. (473 aa)    
Predicted Functional Partners:
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.974
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.924
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.771
ENSSPAP00000007934
HintC domain-containing protein.
   
 0.771
dhh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.758
LOC103356775
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.752
ihh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
 0.752
has2
Hyaluronan synthase 2.
  
 
 0.493
has1
Hyaluronan synthase 1.
  
 
 0.493
has3
Hyaluronan synthase 3.
  
 
 0.493
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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