STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbm7RNA binding motif protein 7. (261 aa)    
Predicted Functional Partners:
zcchc8
Zinc finger, CCHC domain containing 8.
    
 
 0.978
mtrex
Mtr4 exosome RNA helicase.
    
 0.955
ENSSPAP00000015226
Helicase ATP-binding domain-containing protein.
    
 0.955
exosc8
Exosome component 8.
    
 
 0.936
exosc3
Exosome component 3.
    
 
 0.919
sf3b2
Splicing factor 3b, subunit 2.
    
 0.900
exosc7
Exosome component 7.
    
 
 0.870
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
    
 0.792
exosc2
Exosome component 2.
    
 
 0.780
sf1
Splicing factor 1.
    
  0.778
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.