STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipcef1PH domain-containing protein. (434 aa)    
Predicted Functional Partners:
LOC103372737
Uncharacterized protein.
 
      0.899
cnksr3
Uncharacterized protein.
 
      0.835
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.699
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 0.699
araf
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.699
ENSSPAP00000006568
Protein kinase domain-containing protein.
    
 0.671
ENSSPAP00000010209
Protein kinase domain-containing protein.
    
 0.671
ENSSPAP00000021083
Si:ch73-263f13.1.
    
 0.671
LOC103359321
Kinase suppressor of ras 1a.
    
 0.671
rasl11b
RAS-like, family 11, member B.
    
 0.604
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.