STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103370454Solute carrier family 25 member 13; Belongs to the mitochondrial carrier (TC 2.A.29) family. (681 aa)    
Predicted Functional Partners:
TIMM22
Translocase of inner mitochondrial membrane 22.
     
 0.474
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
     
 0.464
LOC103352978
Prohibitin.
    
 
 0.456
LOC103357327
Prohibitin.
    
 
 0.456
stoml1
Stomatin (EPB72)-like 1.
    
 
 0.423
LOC103358872
Cytochrome c-1.
    
  0.411
cactin
Cactin.
     
 0.407
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.