STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371584Lysosomal protein transmembrane 4 beta. (225 aa)    
Predicted Functional Partners:
laptm4a
Lysosomal protein transmembrane 4 alpha.
  
  
 
0.834
LAPTM4B
Lysosomal protein transmembrane 4 beta.
  
  
 
0.830
ENSSPAP00000030644
Matrilin 3a.
 
  
 0.531
ENSSPAP00000013316
Uncharacterized protein.
    
 0.526
ENSSPAP00000016760
Uncharacterized protein.
    
 0.526
ENSSPAP00000016788
Uncharacterized protein.
    
 0.526
ENSSPAP00000016851
Uncharacterized protein.
    
 0.526
ENSSPAP00000019630
Uncharacterized protein.
    
 0.526
MATN2
Matrilin 2.
 
  
 0.526
matn1
Matrilin 1.
 
  
 0.526
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.