STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000026008PDZ domain-containing protein. (225 aa)    
Predicted Functional Partners:
ENSSPAP00000022145
FERM_f0 domain-containing protein.
 
  
  0.881
ENSSPAP00000023042
Si:ch73-335l21.4.
    
 0.878
shank1
SH3 and multiple ankyrin repeat domains 1.
    
0.837
LOC103373068
Uncharacterized protein.
    
0.837
ENSSPAP00000001214
Uncharacterized protein.
    
 0.782
LOC103375499
Uncharacterized protein.
    
 0.782
LOC103366014
Uncharacterized protein.
    
 0.734
dlgap1
Discs, large (Drosophila) homolog-associated protein 1b.
    
 0.734
LOC103359253
Discs, large (Drosophila) homolog-associated protein 2b.
    
 0.734
dlgap2
Discs, large (Drosophila) homolog-associated protein 2a.
    
 0.734
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.