STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COMTD1Catechol-O-methyltransferase domain containing 1. (223 aa)    
Predicted Functional Partners:
tk1
Thymidine kinase.
  
 
  0.795
PNMT
Phenylethanolamine N-methyltransferase.
     
 0.765
TYMP
Thymidine phosphorylase.
    
  0.743
adhfe1
Alcohol dehydrogenase iron containing 1.
    
  0.724
LOC103366494
Si:dkey-10o6.2; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
 
 0.717
sord
Sorbitol dehydrogenase.
  
 
  0.716
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
    
  0.689
pgd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.688
rbm45
RNA binding motif protein 45.
     
 0.688
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.676
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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