STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts8ADAM metallopeptidase with thrombospondin type 1 motif, 15b. (950 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
     
 0.649
LOC103354107
Beta 3-glucosyltransferase b.
    
  0.588
ENSSPAP00000018063
Beta 3-glucosyltransferase a.
    
  0.588
LOC103366219
Brevican.
     
 0.562
LOC103363723
Uncharacterized protein.
     
 0.562
ADAMTS2
ADAM metallopeptidase with thrombospondin type 1 motif 2.
   
 
0.481
LOC103367006
ADAM metallopeptidase with thrombospondin type 1 motif, 14.
   
 
0.481
adamts3
ADAM metallopeptidase with thrombospondin type 1 motif, 3.
   
 
0.481
LOC103356172
Sphingomyelin phosphodiesterase 3, neutral.
     
 0.441
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.