STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
casc4Cancer susceptibility candidate 4. (479 aa)    
Predicted Functional Partners:
acd
Uncharacterized protein.
  
 
  0.682
C1QC
Complement C1q C chain.
   
  0.614
ENSSPAP00000016296
DUF4062 domain-containing protein.
    
 0.588
mbd1
Methyl-CpG binding domain protein 1b.
  
 
  0.586
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.557
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  0.543
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.536
tmed2
Transmembrane p24 trafficking protein 2.
    
 0.535
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
  0.534
casc3
Casc3 exon junction complex subunit.
      
 0.524
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.