STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103369886Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (327 aa)    
Predicted Functional Partners:
rpf2
Ribosome production factor 2 homolog.
   
 
 0.725
utp18
Uncharacterized protein.
   
  
 0.607
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.600
LOC103355287
Ribosomal protein L5.
    
 
 0.594
RPL5
Ribosomal protein L5b.
    
 
 0.594
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.586
wdr43
WD repeat domain 43.
   
    0.580
wdr36
WD repeat domain 36.
   
    0.562
noc2l
Uncharacterized protein.
   
    0.562
LOC103365965
PWP2 small subunit processome component.
   
    0.562
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.