STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358112Ras association domain family member 8b. (437 aa)    
Predicted Functional Partners:
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
    
 
 0.530
ENSSPAP00000006900
Fibronectin type-III domain-containing protein.
    
 
 0.530
LOC103355582
Uncharacterized protein.
    
 
 0.530
tp53bp2
Tumor protein p53 binding protein, 2a.
    
 
 0.530
ppp1r13l
Protein phosphatase 1, regulatory subunit 13 like.
    
 
 0.530
LOC103365836
Protein phosphatase 1, regulatory subunit 13Ba.
    
 
 0.530
LOC103372506
Tumor protein p53 binding protein, 2b.
    
 
 0.507
frmd1
FERM domain containing 1.
    
 
 0.501
frmd6
FERM domain containing 6.
    
 
 0.501
ENSSPAP00000011020
Par3_HAL_N_term domain-containing protein.
    
 
 0.453
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.