STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103372150Secreted phosphoprotein 2. (186 aa)    
Predicted Functional Partners:
LOC103360618
Alpha-2-HS-glycoprotein 2.
   
  
 0.805
LOC103367948
Fibrinogen alpha chain.
   
  
 0.775
apom
Uncharacterized protein.
   
  
 0.768
LOC103367698
Uncharacterized protein.
   
 
  0.753
hgd
Homogentisate 1,2-dioxygenase.
   
    0.746
LOC103365080
Fam20C domain-containing protein.
    
  0.693
LOC103361753
FAM20C golgi associated secretory pathway kinase a.
    
  0.693
LOC103368234
Uncharacterized protein.
   
 
 0.683
LOC103368235
Uncharacterized protein.
   
 
 0.683
LOC103356630
C-type lectin domain family 3, member Bb.
   
 
 0.671
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.