STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nol9Nucleolar protein 9. (700 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.993
tex10
Testis expressed 10.
   
 0.982
crebzf
CREB/ATF bZIP transcription factor.
   
 0.980
las1l
LAS1-like, ribosome biogenesis factor.
   
 0.980
LOC103362103
Proline, glutamate and leucine rich protein 1.
   
 0.962
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.897
cep152
Centrosomal protein 152.
   
 
 0.835
bop1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.835
ENSSPAP00000011916
Uncharacterized protein.
   
 
  0.823
ENSSPAP00000011935
BP28CT domain-containing protein.
   
 
  0.823
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.