STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000026501Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
LOC103366307
Neuronal PAS domain protein 2.
   
0.894
CLOCK
Clock circadian regulator a.
   
0.873
LOC103353165
Clock circadian regulator b.
   
0.873
npas4
Neuronal PAS domain protein 4a.
    
 0.842
ENSSPAP00000008740
Uncharacterized protein.
    
 0.842
LOC103358259
Cryptochrome circadian regulator 3a.
   
 0.822
LOC103375950
Si:ch1073-390k14.1.
   
 0.821
LOC103374779
Cryptochrome circadian regulator 2.
   
 0.821
LOC103354946
Cryptochrome circadian regulator 5.
   
 0.809
LOC103356656
Cryptochrome circadian regulator 1a.
   
 0.796
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (28%) [HD]