STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103375623Dystrobrevin, beta b. (300 aa)    
Predicted Functional Partners:
DTNB
Uncharacterized protein.
 
      0.900
rsph3
Radial spoke head 3.
    
   0.882
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.882
sntb2
Syntrophin, beta 2.
    
 
 0.637
sntb1
Syntrophin, basic 1.
    
 
 0.637
SNTA1
Syntrophin alpha 1.
    
 
 0.637
ENSSPAP00000005909
Utrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
   
 
 0.579
dytn
ZZ-type domain-containing protein.
   
 
 0.579
drp2
Dystrophin related protein 2.
   
 
 0.579
ENSSPAP00000013315
Dystrophin.
   
 
0.579
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.