STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan33Tetraspanin. (278 aa)    
Predicted Functional Partners:
ptch1
Patched 1.
    
  0.704
ptch2
Patched 2.
    
  0.704
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.649
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
    
  0.649
LOC103360420
Macrophage stimulating 1 receptor a.
    
  0.649
mst1r
Macrophage stimulating 1 receptor b.
    
  0.649
ptgfrn
Si:ch211-132g1.7.
    
 
 0.575
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.551
tmem182
Transmembrane protein 182a.
      
 0.503
LOC103359437
Casein kinase 1 gamma 2; Belongs to the protein kinase superfamily.
   
 
  0.496
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.