STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000026855Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
MAP1LC3B
Microtubule-associated protein 1 light chain 3 beta.
    
 0.639
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.639
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.607
gabarapl2
GABA(A) receptor-associated protein like 2.
    
 0.570
GABARAPL2
GABA type A receptor associated protein like 2.
    
 0.570
gabarap
GABA(A) receptor-associated protein b.
    
 0.570
ENSSPAP00000026860
Uncharacterized protein.
 
      0.563
LOC103356239
Microtubule-associated protein 1 light chain 3 gamma, like.
    
 0.554
LOC103367659
Zgc:92606.
    
 0.554
fmr1
Fragile X mental retardation 1.
    
 
 0.536
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.