STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edc3Enhancer of mRNA decapping 3. (474 aa)    
Predicted Functional Partners:
dcp1a
Decapping mRNA 1A.
   
 0.980
ENSSPAP00000019704
Decapping mRNA 2.
  
 0.980
ENSSPAP00000011494
Uncharacterized protein.
   
 0.979
patl1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.962
patl2
PAT1 homolog 2.
    
 0.962
LOC103373921
DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.
  
 0.958
LOC103360126
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 0.958
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
  
 0.958
edc4
Enhancer of mRNA decapping 4.
   
 0.956
ttl
Uncharacterized protein.
    
 
 0.903
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.