STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103365862Transmembrane O-mannosyltransferase targeting cadherins 2b. (842 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.951
ak9
Adenylate kinase 9.
   
 0.889
ints1
Integrator complex subunit 1.
    
 0.881
ints13
Integrator complex subunit 13.
   
 0.865
ints5
Integrator complex subunit 5.
    
 0.853
ints3
Integrator complex subunit 3.
    
 0.852
ints10
Integrator complex subunit 10.
   
 0.833
ints9
Integrator complex subunit 9.
  
 0.797
ints11
Integrator complex subunit 11.
  
 0.791
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.789
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.