STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bag4BCL2 associated athanogene 4. (398 aa)    
Predicted Functional Partners:
LOC103365293
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.944
LOC103353006
Death domain-containing protein.
    
 0.884
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
    
 0.884
LOC103369466
Heat shock protein 4a.
   
 0.846
hspa4
Heat shock protein 4b.
   
 0.846
bag2
BCL2 associated athanogene 2.
    
 0.841
hspa13
Heat shock protein 70 family, member 13.
   
 0.835
hspa4l
Heat shock protein 4 like.
   
 0.827
dcp1a
Decapping mRNA 1A.
    
   0.816
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
   
 0.815
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.